[Tex/LaTex] Dataset reference style in BibLaTeX

biblatex

The journal I am submitting to wants datasets to be listed in the reference as

[dataset] Authors; Year; Dataset title; Data repository or archive; Version (if any); Persistent identifier (e.g. DOI),

where "[dataset]" at the beginning is literal. The type of other references (articles, books, etc) does not need to be prefixed in this way.

biblatex has a @dataset entry type, and I have gotten close to the target using this:

\documentclass{article}
\usepackage[style=apa]{biblatex}

\begin{filecontents}{\jobname.bib}
@dataset{test,
  author = {The Author},
  title = {Very Big and Important Dataset},
  year = {2020},
  doi = {XX.XXXX/XXX.XXXX.XXXXXXXX},
  publisher = {Dryad}}
\end{filecontents}

\addbibresource{\jobname.bib}

\begin{document}
  Text \parencite{test}.

  \printbibliography
\end{document}

This looks pretty good, but how can I get the [dataset] added to the beginning?

Best Answer

With most biblatex styles you can hook into the beginning of the entry by redefining the bibmacro begentry. Then it's just a matter of checking the entry type and printing a suitable string.

The original definition of begentry can be found in apa.bbx (ll. 673-674).

\documentclass{article}
\usepackage[style=apa]{biblatex}

\NewBibliographyString{dataset}

\DefineBibliographyStrings{english}{
  dataset = {dataset},
}

\renewbibmacro{begentry}{%
  \ifkeyword{meta}{\textsuperscript{*}}{}%
  \ifentrytype{dataset}
    {\bibstring[\mkbibbrackets]{dataset}%
     \setunit{\addspace}}
    {}%
}

\begin{filecontents}{\jobname.bib}
@dataset{test,
  author    = {The Author},
  title     = {Very Big and Important Dataset},
  year      = {2020},
  doi       = {XX.XXXX/XXX.XXXX.XXXXXXXX},
  publisher = {Dryad},
}
\end{filecontents}
\addbibresource{\jobname.bib}

\begin{document}
  Text \autocite{test}.

  \printbibliography
\end{document}

I don't think this kind of markup is particularly useful. Most readers who care can probably tell that the entry is a data set fairly quickly anyway. What I find most problematic about this is that the "[dataset]" visually shields the "Author 2020" in the bibliography, but "Author 2020" is relevant for sorting.

Related Solutions

[Tex/LaTex] biblatex messing up citation entry with lots of authors

This problem is due to biblatex-apa's (apa.bbx's) apaauthor name format; you might want to notify the author of this small bug.

The string and others in the author list sets ifmorenames to true. apaauthor checks for this case whenever a name is printed, not just at the very end of the list; consequently it prints the andothers string ("et al.") after each name.

The fix is to add the following lines to your preamble.

\DeclareNameFormat{apaauthor}{%
  \ifthenelse{\value{listcount}=\maxprtauth\AND\value{listcount}<\value{listtotal}}
    {\addcomma\addspace\ldots\addspace}
    {\ifthenelse{\value{listcount}>\maxprtauth\AND\value{listcount}<\value{listtotal}}
      {}
      {\ifthenelse{\iffieldequalstr{doubtfulauthor}{true}}
        {\mkbibbrackets{\usebibmacro{name:apa:last-first}{#1}{#3}{#4}{#5}{#7}?}}
        {\usebibmacro{name:apa:last-first}{#1}{#3}{#4}{#5}{#7}}}}%
  \ifthenelse{\value{listcount}=\value{listtotal}}% this test is new
    {\ifmorenames{\andothersdelim\bibstring{andothers}}{}}{}}

The MWE

\RequirePackage{filecontents}
\begin{filecontents*}{\jobname.bib}
@Article{boker2011,
Author = {Boker, S. and Neale, M. and Maes, H. and Wilde, M. and
Spiegel, M. and Brick, T. and Spies, J. and Estabrook,
R. and Kenny, S. and Bates, T. and others},
Title = {Open{M}x: {A}n open source extended structural
equation modeling framework},
Journal = {Psychometrika},
Volume = {76},
Number = {2},
Pages = {306--317},
year = 2011
}


\documentclass{apa6}
\usepackage[american]{babel}
\usepackage{csquotes}
\usepackage[style=apa,maxnames=999,sortcites=true,sorting=nyt,apabackref=true,backend=biber]{biblatex}
\DeclareLanguageMapping{american}{american-apa}
\addbibresource{\jobname.bib}
\addbibresource{biblatex-examples.bib}

\DeclareNameFormat{apaauthor}{%
  \ifthenelse{\value{listcount}=\maxprtauth\AND\value{listcount}<\value{listtotal}}
    {\addcomma\addspace\ldots\addspace}
    {\ifthenelse{\value{listcount}>\maxprtauth\AND\value{listcount}<\value{listtotal}}
      {}
      {\ifthenelse{\iffieldequalstr{doubtfulauthor}{true}}
        {\mkbibbrackets{\usebibmacro{name:apa:last-first}{#1}{#3}{#4}{#5}{#7}?}}
        {\usebibmacro{name:apa:last-first}{#1}{#3}{#4}{#5}{#7}}}}%
  \ifthenelse{\value{listcount}=\value{listtotal}}
    {\ifmorenames{\andothersdelim\bibstring{andothers}}{}}{}}

\shorttitle{IFA}

\begin{document}

OpenMx \parencite{boker2011,aksin,wilde,murray}

\printbibliography
\end{document}

then yields

enter image description here

Update 2013-10: This has been corrected in biblatex-apa version 6.4 according to a comment below the question from user PLK.

[Tex/LaTex] Citing (author, journalabbr., year) needed

First thing to do is to add a field for the journal abbreviation to the article entrytype, journalabbr in the MWE. Therefore you need to declare a datamodel (an extra file; in the MWE I've used filecontents to simulate that) and you have to tell biblatex/biber to use it in the package options.

Then you have to modify the cite command, so it fits your needs. \citep from the authoryear-style (your citestyle) uses the \cite command. There you just have to add a switch, which checks if the field journalabbr is empty or not, and prints it out or not.

Last but not least you have to add the abbreviation fields to the entries.

MWE:

\begin{filecontents}{min.bib}
@article{boisson2003unexpected,
  title={Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote},
  author={Boisson, B. and Giglione, Carmela and Meinnel, Thierry},
  journal={Journal of Biological Chemistry},
  journalabbr={JBC},
  year={2003},
  publisher={ASBMB}
}
\end{filecontents}

\begin{filecontents}{authorjabbryear.dbx}
\ProvidesFile{authorjabbryear.dbx}
\DeclareDatamodelFields[type=field,datatype=literal]{journalabbr}
\DeclareDatamodelEntryfields[article]{journalabbr}
\end{filecontents}

\documentclass[fontsize=11pt, paper=a4, ngerman, DIV=calc]{scrartcl}
\usepackage[scaled]{helvet}
\renewcommand*\familydefault{\sfdefault}
\usepackage{fixltx2e}
\usepackage[utf8]{inputenc}
\usepackage[T1]{fontenc}
\usepackage{lmodern}
\usepackage{babel}
\usepackage[german=quotes]{csquotes}
\usepackage[style=authoryear-comp,sortcites=true,sorting=nyt,isbn=false,natbib=true, citestyle=authoryear,bibstyle=authoryear,backend=biber,maxnames=1,maxcitenames=1,
,datamodel=authorjabbryear%added!
] {biblatex}

\DefineBibliographyStrings{ngerman}{ andothers = {{et\,al\adddot}} }

\renewbibmacro*{cite}{%from authoryear.cbx
  \iffieldundef{shorthand}
    {\ifthenelse{\ifnameundef{labelname}\OR\iffieldundef{labelyear}}
       {\usebibmacro{cite:label}%
        \setunit{\addspace}}
       {\printnames{labelname}%
        \setunit{\nameyeardelim}}%
     \iffieldundef{journalabbr}{}{%
        \printfield{journalabbr}%
        \setunit{\nameyeardelim}%
        }%
     \usebibmacro{cite:labelyear+extrayear}}
    {\usebibmacro{cite:shorthand}}}

\addbibresource{min.bib}

\begin{document}

\citep{boisson2003unexpected} 

How it should look like: 

(Boisson et al., JBC, 2003)

\printbibliography

\end{document}

Best Answer

Related Solutions

[Tex/LaTex] biblatex messing up citation entry with lots of authors

[Tex/LaTex] Citing (author, journalabbr., year) needed

Related Question