I am using the "boxchart" function with two arguments (i.e. "xgroupdata" and "ydata") to create multiple box charts in a plot. However, I want the boxes to be ordered by group mean, that is, the boxes should be sorted from lowest mean to highest mean. Is there any way to achieve this workflow?
MATLAB: How to sort the boxes produced by “boxchart” by mean
boxboxchartboxplotgroupMATLABmeanordersortedStatistics and Machine Learning Toolbox
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boxchart vs boxplot
>with r2020 there is finally a grouped boxplot called "boxchart".
The boxplot() function also has grouping options, has been around for much longer, and is often easier to customize than the newer standalone visualzation boxchart function.
ColorGroup & Notches
>How does one apply any property simultaneously to all boxes instead of looping? For instance like b.Notch = 'on' or a colormap to the ColorGroup?
To apply changes to a group of handles to existing graphics objects, follow this example, although the loop you mentioned is also fine and just as fast (faster?),
h = boxchart(___); % h is a vector of handles
set(h, {'BoxFaceColor'}, mat2cell(jet(numel(h)),ones(numel(h),1),3)) % jet is a colormap
Matlab documentation has a demo showing how to change colors in single bars or groups.
Separation lines
>How could I add separation lines?
For boxchart, this option currently doesn't exist (r2020b). If the x-axis is numeric, add divider lines using,
h = boxchart(__);xline(x) % where x is the location of the line
If the x-axis is categorical it's a lot more complicated because divider lines cannot be added between categories. To add divider lines on a categorical x-axis you have to add additional categories to the x axis ticks, set their order, and then use xline() (or plot() or line()) with categorical x-values.
% Create boxchart showing 12 months of data
monthNum = randi(12,200,1);data = rand(200,1)*100.*(normpdf(monthNum,6,1)+.25);monthAbrv = categorical(monthNum,1:12,month(datetime(1, 1:12, 1), 's'));figure()h = boxchart(monthAbrv, data); % Separate seasons by divider lines
% First add categories to the x-axis
ax = h.Parent; % axis handle
ax.XAxis.Categories' % view current categories.
ax.XAxis.Categories = { 'Jan' 'Feb' 'Spring',... 'Mar' 'Apr' 'May' 'Summer',... 'Jun' 'Jul' 'Aug' 'Fall',... 'Sep' 'Oct' 'Nov' 'Winter',... 'Dec'};% Add xlines on seasonal categories
arrayfun(@(x)xline(x,'r-','LineWidth',1.5),categorical({'Spring','Summer','Fall','Winter'}))% xline(__) for single lines
% if you want to label each line,
% arrayfun(@(x)xline(x,'r-',x,'LineWidth',1.5),categorical({'Spring','Summer','Fall','Winter'}))
% If needed, removed seasonal tick labels
ax.XTickLabel([3,7,11,15]) = {''};
Fix overlapping boxes in boxchart
>Why can't I seem to get a correct looking diagram when plotting [with grouped data]?
You can fix the overlapping boxes by making the grouping variable categorical
boxchart(categorical(xgroupdata),ydata, 'GroupByColor', group);Adding text labels
> I would like to be able to add a textlabel to any of the boxes
Use the text() function. See the bottom of this answer to learn how to get the x value of the boxplot centers.
For numeric axes it's as easy as using the text() function but for categorical axes, you must use categorical coordinates. This demo below shows the number of samples in each category and plots that number above the median lines.
% Produce boxchart
figure()h = boxchart(randi(5,100,1),rand(100,1));% compute median and number of samples for each box
[groupID, groups] = findgroups(h.XData);medians = splitapply(@median,h.YData,groupID);nSamples = splitapply(@numel,h.YData,groupID);% Plot text
text(groups, medians, compose('n=%d',nSamples),... 'HorizontalAlignment','Center','VerticalAlignment','bottom', ... 'FontSize',8)
Extracting location of boxs
>I need to a) figure out the position of the boxes but I don't manage to understand the structure of the handle
Extracting the location of the boxes from the graphics handle involves accessing each graphics element and examining its coordinates. It's not easy but achievable with boxplot (see this answer). I haven't figured out a way to achieve this with boxchart as of r2020b.
Of course many of the parameters can be computed using the raw data.
The median marker are easy to get using,
h = boxchart(__);[groupID, groups] = findgroups(h.XData);medians = splitapply(@median,h.YData,groupID);The upper and lower edges of the boxes are the 25th and 75th quartiles,
h = boxchart(__);[groupID, groups] = findgroups(h.XData);bounds = splitapply(@(y)quantile(y,[.25,.75]),h.YData,groupID);The whisker ends are a bit more difficult. They mark the max/min values that are not outliers so first you have to compute the outlier thresholds. Outliers are any values that are greater than 1.5*IQR from the medians. IQR is computed for each box below. See documentation for more info.
h = boxchart(__);[groupID, groups] = findgroups(h.XData);IQR = splitapply(@iqr,h.YData,groupID);The box centers and Left/Right edges for numeric axes are calculated using
h = boxchart(__);boxCenters = unique(h.XData);boxEdges = boxCenters(:) + h.BoxWidth.*[-1,1]; % for numeric matrices only
I think the error is because you are using the syntax boxchart(xgroupdata,ydata), but your inputs are reversed. You put the grouping variable second. Also, your grouping data is not valid for use as xgroupdata.
boxchart(___,'GroupByColor',cgroupdata)Therefore, try changing your code to
boxchart(data_dB1,'GroupByColor',dates_concatenated)
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