I have a paper to submit in an hour, and have an issue with the \maketitle command. The template provided to me does not work, and the instructor has told me to figure it out on my own.
Here is a simplified example:
\documentclass{bioinfo}
\copyrightyear{2014}
\pubyear{2014}
\begin{document}
\firstpage{1}
\title[QTL Analysis]{Evaluation of a QTL Dataset}
\author[Robert R. Gotwals]{Robert R. Gotwals\,\footnote{to whom correspondence should be addressed}}
\address{$^{1}$Department of XXXXXXX, Address XXXX etc.}
\history{Received on XXXXX; revised on XXXXX; accepted on XXXXX}
\maketitle
\begin{abstract}
Here's the abstract.
\section{Keywords:} first, second, third, fourth
\section{Contact:} \href{cowbell@ncssm.edu}{gotwals@ncssm.edu}
\end{abstract}
\section{Introduction}
Lorem ipsum dolor sit amet, consectetur adipisicing elit, sed do eiusmod tempor incididunt ut labore et dolore.
\end{document}
The .log file:
This is pdfTeX, Version 3.1415926-2.4-1.40.13 (MiKTeX 2.9 64-bit) (preloaded format=pdflatex 2013.12.9) 28 MAY 2014 20:50
entering extended mode
**document.tex
("C:\Users\chire001\Documents\Jeffrey Files\School\CompBio\Final Project\Docume
nt\document.tex"
LaTeX2e <2011/06/27>
Babel <v3.8m> and hyphenation patterns for english, afrikaans, ancientgreek, ar
abic, armenian, assamese, basque, bengali, bokmal, bulgarian, catalan, coptic,
croatian, czech, danish, dutch, esperanto, estonian, farsi, finnish, french, ga
lician, german, german-x-2012-05-30, greek, gujarati, hindi, hungarian, iceland
ic, indonesian, interlingua, irish, italian, kannada, kurmanji, latin, latvian,
lithuanian, malayalam, marathi, mongolian, mongolianlmc, monogreek, ngerman, n
german-x-2012-05-30, nynorsk, oriya, panjabi, pinyin, polish, portuguese, roman
ian, russian, sanskrit, serbian, slovak, slovenian, spanish, swedish, swissgerm
an, tamil, telugu, turkish, turkmen, ukenglish, ukrainian, uppersorbian, usengl
ishmax, welsh, loaded.
("C:\Users\chire001\Documents\Jeffrey Files\School\CompBio\Final Project\Docume
nt\bioinfo.cls"
Document Class: bioinfo 2003/02/08 0.1
("C:\Program Files\MiKTeX 2.9\tex\latex\base\inputenc.sty"
Package: inputenc 2008/03/30 v1.1d Input encoding file
\inpenc@prehook=\toks14
\inpenc@posthook=\toks15
)
("C:\Users\chire001\Documents\Jeffrey Files\School\CompBio\Final Project\Docume
nt\crop.sty"
Package: crop 2001/11/16 v1.6 cropmarks (mf)
\CROP@width=\dimen102
\CROP@height=\dimen103
\CROP@index=\count79
("C:\Program Files\MiKTeX 2.9\tex\latex\graphics\graphics.sty"
Package: graphics 2009/02/05 v1.0o Standard LaTeX Graphics (DPC,SPQR)
("C:\Program Files\MiKTeX 2.9\tex\latex\graphics\trig.sty"
Package: trig 1999/03/16 v1.09 sin cos tan (DPC)
)
("C:\Program Files\MiKTeX 2.9\tex\latex\00miktex\graphics.cfg"
File: graphics.cfg 2007/01/18 v1.5 graphics configuration of teTeX/TeXLive
)
Package graphics Info: Driver file: pdftex.def on input line 91.
("C:\Program Files\MiKTeX 2.9\tex\latex\pdftex-def\pdftex.def"
File: pdftex.def 2011/05/27 v0.06d Graphics/color for pdfTeX
("C:\Program Files\MiKTeX 2.9\tex\generic\oberdiek\infwarerr.sty"
Package: infwarerr 2010/04/08 v1.3 Providing info/warning/error messages (HO)
)
("C:\Program Files\MiKTeX 2.9\tex\generic\oberdiek\ltxcmds.sty"
Package: ltxcmds 2011/11/09 v1.22 LaTeX kernel commands for general use (HO)
)
\Gread@gobject=\count80
))
\CROP@offset=\count81
Package crop Info: Local config file crop.cfg used on input line 344.
("C:\Program Files\MiKTeX 2.9\tex\xelatex\xetexconfig\crop.cfg"))
Package crop Info: using pdf(la)tex graphics driver on input line 33.
("C:\Program Files\MiKTeX 2.9\tex\latex\graphics\graphicx.sty"
Package: graphicx 1999/02/16 v1.0f Enhanced LaTeX Graphics (DPC,SPQR)
("C:\Program Files\MiKTeX 2.9\tex\latex\graphics\keyval.sty"
Package: keyval 1999/03/16 v1.13 key=value parser (DPC)
\KV@toks@=\toks16
)
\Gin@req@height=\dimen104
\Gin@req@width=\dimen105
)
("C:\Program Files\MiKTeX 2.9\tex\latex\amsmath\amsmath.sty"
Package: amsmath 2013/01/14 v2.14 AMS math features
\@mathmargin=\skip41
For additional information on amsmath, use the `?' option.
("C:\Program Files\MiKTeX 2.9\tex\latex\amsmath\amstext.sty"
Package: amstext 2000/06/29 v2.01
("C:\Program Files\MiKTeX 2.9\tex\latex\amsmath\amsgen.sty"
File: amsgen.sty 1999/11/30 v2.0
\@emptytoks=\toks17
\ex@=\dimen106
))
("C:\Program Files\MiKTeX 2.9\tex\latex\amsmath\amsbsy.sty"
Package: amsbsy 1999/11/29 v1.2d
\pmbraise@=\dimen107
)
("C:\Program Files\MiKTeX 2.9\tex\latex\amsmath\amsopn.sty"
Package: amsopn 1999/12/14 v2.01 operator names
)
\inf@bad=\count82
LaTeX Info: Redefining \frac on input line 210.
\uproot@=\count83
\leftroot@=\count84
LaTeX Info: Redefining \overline on input line 306.
\classnum@=\count85
\DOTSCASE@=\count86
LaTeX Info: Redefining \ldots on input line 378.
LaTeX Info: Redefining \dots on input line 381.
LaTeX Info: Redefining \cdots on input line 466.
\Mathstrutbox@=\box26
\strutbox@=\box27
\big@size=\dimen108
LaTeX Font Info: Redeclaring font encoding OML on input line 566.
LaTeX Font Info: Redeclaring font encoding OMS on input line 567.
\macc@depth=\count87
\c@MaxMatrixCols=\count88
\dotsspace@=\muskip10
\c@parentequation=\count89
\dspbrk@lvl=\count90
\tag@help=\toks18
\row@=\count91
\column@=\count92
\maxfields@=\count93
\andhelp@=\toks19
\eqnshift@=\dimen109
\alignsep@=\dimen110
\tagshift@=\dimen111
\tagwidth@=\dimen112
\totwidth@=\dimen113
\lineht@=\dimen114
\@envbody=\toks20
\multlinegap=\skip42
\multlinetaggap=\skip43
\mathdisplay@stack=\toks21
LaTeX Info: Redefining \[ on input line 2665.
LaTeX Info: Redefining \] on input line 2666.
)
("C:\Program Files\MiKTeX 2.9\tex\latex\tools\array.sty"
Package: array 2008/09/09 v2.4c Tabular extension package (FMi)
\col@sep=\dimen115
\extrarowheight=\dimen116
\NC@list=\toks22
\extratabsurround=\skip44
\backup@length=\skip45
)
("C:\Program Files\MiKTeX 2.9\tex\latex\graphics\color.sty"
Package: color 2005/11/14 v1.0j Standard LaTeX Color (DPC)
("C:\Program Files\MiKTeX 2.9\tex\latex\00miktex\color.cfg"
File: color.cfg 2007/01/18 v1.5 color configuration of teTeX/TeXLive
)
Package color Info: Driver file: pdftex.def on input line 130.
)
("C:\Program Files\MiKTeX 2.9\tex\latex\amsfonts\amssymb.sty"
Package: amssymb 2013/01/14 v3.01 AMS font symbols
("C:\Program Files\MiKTeX 2.9\tex\latex\amsfonts\amsfonts.sty"
Package: amsfonts 2013/01/14 v3.01 Basic AMSFonts support
\symAMSa=\mathgroup4
\symAMSb=\mathgroup5
LaTeX Font Info: Overwriting math alphabet `\mathfrak' in version `bold'
(Font) U/euf/m/n --> U/euf/b/n on input line 106.
))
(C:\Users\chire001\AppData\Roaming\MiKTeX\2.9\tex\latex\sttools\flushend.sty
Package: flushend 2014/04/24 v2.2 Balancing columns in twocolumn mode
\flushend@@lastskip@a=\skip46
\flushend@@lastskip@b=\skip47
\flushend@@lastskip@c=\skip48
\flushend@@penalty@a=\count94
\flushend@@lastkern@a=\dimen117
\var@@temp@spread=\dimen118
\var@@temp@a=\dimen119
\flushend@@page@rule=\dimen120
\flushend@@varbox@a=\box28
\flushend@@varbox@c=\box29
\flushend@@tempbox@a=\box30
\flushend@@tempbox@c=\box31
\@viper=\box32
\hold@viper=\box33
\atColsBreak=\toks23
\atColsEnd=\toks24
(C:\Users\chire001\AppData\Roaming\MiKTeX\2.9\tex\latex\etoolbox\etoolbox.sty
Package: etoolbox 2011/01/03 v2.1 e-TeX tools for LaTeX
("C:\Program Files\MiKTeX 2.9\tex\latex\misc\etex.sty"
Package: etex 1998/03/26 v2.0 eTeX basic definition package (PEB)
\et@xins=\count95
)
\etb@tempcnta=\count96
))
(C:\Users\chire001\AppData\Roaming\MiKTeX\2.9\tex\latex\sttools\stfloats.sty
Package: stfloats 2012/05/29 v1.1 Improve float mechanism and baselineskip sett
ings
\@dblbotnum=\count97
\c@dblbotnumber=\count98
)
("C:\Program Files\MiKTeX 2.9\tex\latex\amscls\amsthm.sty"
Package: amsthm 2004/08/06 v2.20
\thm@style=\toks25
\thm@bodyfont=\toks26
\thm@headfont=\toks27
\thm@notefont=\toks28
\thm@headpunct=\toks29
\thm@preskip=\skip49
\thm@postskip=\skip50
\thm@headsep=\skip51
\dth@everypar=\toks30
)
("C:\Program Files\MiKTeX 2.9\tex\latex\ltxmisc\chngpage.sty"
Package: chngpage 2003/08/10 v1.2 change page layout
\c@cp@cnt=\count99
\c@cp@tempcnt=\count100
)
("C:\Program Files\MiKTeX 2.9\tex\latex\psnfss\times.sty"
Package: times 2005/04/12 PSNFSS-v9.2a (SPQR)
)
\c@section=\count101
\c@subsection=\count102
\c@subsubsection=\count103
\c@paragraph=\count104
\c@subparagraph=\count105
\c@figure=\count106
\c@table=\count107
\dropfromtop=\skip52
\extraspace=\skip53
\aboveskipchk=\skip54
\abovecaptionskip=\skip55
\belowcaptionskip=\skip56
\rotdimen=\dimen121
\tempdime=\dimen122
\temptbox=\box34
(C:\Users\chire001\AppData\Roaming\MiKTeX\2.9\tex\latex\natbib\natbib.sty
Package: natbib 2010/09/13 8.31b (PWD, AO)
\bibhang=\skip57
\bibsep=\skip58
LaTeX Info: Redefining \cite on input line 694.
\c@NAT@ctr=\count108
))
("C:\Users\chire001\Documents\Jeffrey Files\School\CompBio\Final Project\Docume
nt\document.aux")
LaTeX Font Info: Checking defaults for OML/cmm/m/it on input line 5.
LaTeX Font Info: ... okay on input line 5.
LaTeX Font Info: Checking defaults for T1/cmr/m/n on input line 5.
LaTeX Font Info: ... okay on input line 5.
LaTeX Font Info: Checking defaults for OT1/cmr/m/n on input line 5.
LaTeX Font Info: ... okay on input line 5.
LaTeX Font Info: Checking defaults for OMS/cmsy/m/n on input line 5.
LaTeX Font Info: ... okay on input line 5.
LaTeX Font Info: Checking defaults for OMX/cmex/m/n on input line 5.
LaTeX Font Info: ... okay on input line 5.
LaTeX Font Info: Checking defaults for U/cmr/m/n on input line 5.
LaTeX Font Info: ... okay on input line 5.
LaTeX Font Info: Try loading font information for OT1+ptm on input line 5.
("C:\Program Files\MiKTeX 2.9\tex\latex\psnfss\ot1ptm.fd"
File: ot1ptm.fd 2001/06/04 font definitions for OT1/ptm.
)
(C:\Users\chire001\AppData\Roaming\MiKTeX\2.9\tex\context\base\supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
\scratchcounter=\count109
\scratchdimen=\dimen123
\scratchbox=\box35
\nofMPsegments=\count110
\nofMParguments=\count111
\everyMPshowfont=\toks31
\MPscratchCnt=\count112
\MPscratchDim=\dimen124
\MPnumerator=\count113
\makeMPintoPDFobject=\count114
\everyMPtoPDFconversion=\toks32
)
LaTeX Font Info: Try loading font information for OT1+phv on input line 14.
("C:\Program Files\MiKTeX 2.9\tex\latex\psnfss\ot1phv.fd"
File: ot1phv.fd 2001/06/04 scalable font definitions for OT1/phv.
)
LaTeX Font Info: Font shape `OT1/phv/m/it' in size <9> not available
(Font) Font shape `OT1/phv/m/sl' tried instead on input line 14.
LaTeX Font Info: Font shape `OT1/phv/bx/it' in size <9> not available
(Font) Font shape `OT1/phv/b/it' tried instead on input line 14.
LaTeX Font Info: Font shape `OT1/phv/b/it' in size <9> not available
(Font) Font shape `OT1/phv/b/sl' tried instead on input line 14.
LaTeX Font Info: Font shape `OT1/phv/bx/it' in size <19> not available
(Font) Font shape `OT1/phv/b/it' tried instead on input line 14.
LaTeX Font Info: Font shape `OT1/phv/b/it' in size <19> not available
(Font) Font shape `OT1/phv/b/sl' tried instead on input line 14.
LaTeX Font Info: Font shape `OT1/phv/m/it' in size <8> not available
(Font) Font shape `OT1/phv/m/sl' tried instead on input line 14.
LaTeX Font Info: Font shape `OT1/phv/bx/n' in size <9> not available
(Font) Font shape `OT1/phv/b/n' tried instead on input line 14.
LaTeX Font Info: Font shape `OT1/phv/bx/n' in size <16> not available
(Font) Font shape `OT1/phv/b/n' tried instead on input line 14.
LaTeX Font Info: Calculating math sizes for size <13> on input line 14.
LaTeX Font Warning: Font shape `OT1/cmr/m/n' in size <13> not available
(Font) size <12> substituted on input line 14.
LaTeX Font Warning: Font shape `OT1/cmr/m/n' in size <6.5> not available
(Font) size <6> substituted on input line 14.
LaTeX Font Warning: Font shape `OML/cmm/m/it' in size <13> not available
(Font) size <12> substituted on input line 14.
LaTeX Font Warning: Font shape `OML/cmm/m/it' in size <6.5> not available
(Font) size <6> substituted on input line 14.
LaTeX Font Warning: Font shape `OMS/cmsy/m/n' in size <13> not available
(Font) size <12> substituted on input line 14.
LaTeX Font Warning: Font shape `OMS/cmsy/m/n' in size <6.5> not available
(Font) size <6> substituted on input line 14.
LaTeX Font Info: Try loading font information for U+msa on input line 14.
("C:\Program Files\MiKTeX 2.9\tex\latex\amsfonts\umsa.fd"
File: umsa.fd 2013/01/14 v3.01 AMS symbols A
)
LaTeX Font Info: Try loading font information for U+msb on input line 14.
("C:\Program Files\MiKTeX 2.9\tex\latex\amsfonts\umsb.fd"
File: umsb.fd 2013/01/14 v3.01 AMS symbols B
)
LaTeX Font Info: Calculating math sizes for size <9.09996> on input line 14.
LaTeX Font Warning: Font shape `OT1/cmr/m/n' in size <4.54997> not available
(Font) size <5> substituted on input line 14.
LaTeX Font Warning: Font shape `OML/cmm/m/it' in size <4.54997> not available
(Font) size <5> substituted on input line 14.
LaTeX Font Warning: Font shape `OMS/cmsy/m/n' in size <4.54997> not available
(Font) size <5> substituted on input line 14.
LaTeX Font Warning: Font shape `OT1/cmr/m/n' in size <7.5> not available
(Font) size <7> substituted on input line 14.
LaTeX Font Warning: Font shape `OML/cmm/m/it' in size <7.5> not available
(Font) size <7> substituted on input line 14.
LaTeX Font Warning: Font shape `OMS/cmsy/m/n' in size <7.5> not available
(Font) size <7> substituted on input line 14.
! Undefined control sequence.
<argument> ...2}\selectfont \raggedright \@editor
\par } \@@par
l.14 \maketitle
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
spelling (e.g., `I\hbox'). Otherwise just continue,
and I'll forget about whatever was undefined.
Underfull \hbox (badness 10000) detected at line 14
[]
[]
LaTeX Font Info: Font shape `OT1/phv/bx/n' in size <8> not available
(Font) Font shape `OT1/phv/b/n' tried instead on input line 20.
LaTeX Font Info: Font shape `OT1/phv/bx/n' in size <10> not available
(Font) Font shape `OT1/phv/b/n' tried instead on input line 25.
- LAST -
Extra skip:28.55157pt
Left:87.0pt/1.77998pt
Right:58.44843pt/3.00003pt
Output:87.0pt
LaTeX Font Info: Try loading font information for OMS+phv on input line 29.
("C:\Program Files\MiKTeX 2.9\tex\latex\psnfss\omsphv.fd"
File: omsphv.fd
)
LaTeX Font Info: Font shape `OMS/phv/m/n' in size <7> not available
(Font) Font shape `OMS/cmsy/m/n' tried instead on input line 29.
[1
{C:/Users/chire001/AppData/Local/MiKTeX/2.9/pdftex/config/pdftex.map}
]
("C:\Users\chire001\Documents\Jeffrey Files\School\CompBio\Final Project\Docume
nt\document.aux")
LaTeX Font Warning: Size substitutions with differences
(Font) up to 1.0pt have occurred.
)
Here is how much of TeX's memory you used:
3376 strings out of 493921
42650 string characters out of 3147273
105221 words of memory out of 3000000
6603 multiletter control sequences out of 15000+200000
36737 words of font info for 84 fonts, out of 3000000 for 9000
845 hyphenation exceptions out of 8191
37i,11n,28p,856b,294s stack positions out of 5000i,500n,10000p,200000b,50000s
{C:/Program Files/MiKTeX 2.9/fonts/enc/dvips/fontname/8r.enc}<C:/Program File
s/MiKTeX 2.9/fonts/type1/public/amsfonts/cm/cmr7.pfb><C:/Program Files/MiKTeX 2
.9/fonts/type1/public/amsfonts/cm/cmsy6.pfb><C:/Program Files/MiKTeX 2.9/fonts/
type1/public/amsfonts/cm/cmsy7.pfb><C:/Program Files/MiKTeX 2.9/fonts/type1/pub
lic/amsfonts/cm/cmsy9.pfb><C:/Program Files/MiKTeX 2.9/fonts/type1/urw/helvetic
/uhvb8a.pfb><C:/Program Files/MiKTeX 2.9/fonts/type1/urw/helvetic/uhvbo8a.pfb><
C:/Program Files/MiKTeX 2.9/fonts/type1/urw/helvetic/uhvr8a.pfb><C:/Program Fil
es/MiKTeX 2.9/fonts/type1/urw/helvetic/uhvro8a.pfb><C:/Program Files/MiKTeX 2.9
/fonts/type1/urw/times/utmr8a.pfb>
Output written on document.pdf (1 page, 75748 bytes).
PDF statistics:
43 PDF objects out of 1000 (max. 8388607)
0 named destinations out of 1000 (max. 500000)
1 words of extra memory for PDF output out of 10000 (max. 10000000)
The bioinfo document class can be downloaded from http://www.oxfordjournals.org.
Does anyone have any idea of what is going wrong? System is Texmaker (compiler is Miktex) on 64-bit Windows 7. Code also refuses to compile on ShareLaTeX.
Thanks!
Best Answer
The
bioinfoclass requires to use\editor; otherwise, an error message is triggered:If you don't want to provide information for the editor, you still need to use
\editorbut with an empty argumeny: