[Tex/LaTex] kable_styling for alternative row colors in Rmarkdown

colormarkdownpdftexr

I'm trying to use kable and kableExtra to generate a table in latex document at Rmarkdown.

I have used the xcolor package in the header of .Rmd file :

header-includes: 
\usepackage{xcolor}

but when I use latex_options = "striped" in kable_styling

I'm getting the error :

knitr::kable(cbind(main()$AEP),format = "latex",booktabs = T)%>%
kable_styling(latex_options="striped",position = "center",full_width = F)

Warning: running command '"C:/Program Files/RStudio/bin/pandoc/pandoc" +RTS -K512m -RTS report.utf8.md --to latex --from markdown+autolink_bare_uris+ascii_identifiers+tex_math_single_backslash --output report.pdf --template "C:\Users\ali.hadjihosseini\Documents\R\win-library\3.4\rmarkdown\rmd\latex\default-1.17.0.2.tex" --highlight-style tango --latex-engine pdflatex --variable graphics=yes --variable "geometry:margin=1in"' had status 43
Warning: Error in : pandoc document conversion failed with error 43
Stack trace (innermost first):
    53: pandoc_convert
    52: convert
    51: render
    50: download$func [C:\Users\ali\Desktop\dashbord\/server.R#1164]
     1: runApp
Error : pandoc document conversion failed with error 43

If I don't use that latex_options="striped", everything is fine ! Can anybody tell me what is wrong here ?

Best Answer

kableExtra load \usepackage[table]{xcolor} automatically. It means that if you load \usepackage{xcolor}, there will be a conflict in xcolor options.

You can read more in the "LaTeX packages used in this package" section of the vignette. https://cran.r-project.org/web/packages/kableExtra/vignettes/awesome_table_in_pdf.pdf

Related Solutions

[Tex/LaTex] align, aligned and R Markdown

So, just to be clear (as it says this is unanswered), just write the align (without $$):

\begin{align}
a_1 &= \beta_0 \\
b_1 &= \beta_1 \\
c_1 &= \beta_2 \\
d_1 &= \beta_3
\end{align}

and not

$$
\begin{align}
a_1 &= \beta_0 \\
b_1 &= \beta_1 \\
c_1 &= \beta_2 \\
d_1 &= \beta_3
\end{align}
$$

[Tex/LaTex] alternate row colors for only some columns

To obtain above image I first clean-up your code. It contain bunch of errors caused by wrong use options (they had to be inside [...] and not in math environment \[...\]). Then to each cell, which you like to have colored, wrote \cellcolor{<selected color>}. This is only way (for which I know) that you have only part row in desired color. To simplify this task (since all colors ara based on blue), I defined new command:

\newcommand{\CC}[1]{\cellcolor{blue!#1}}

and (after lot of work) I rewrote your MWE into:

\documentclass[6pt, oneside]{article}
\usepackage{geometry}
\geometry{letterpaper}
\usepackage{graphicx}
\usepackage{amssymb}
\usepackage{booktabs}
\usepackage{multirow}
\usepackage{tabularx}
%\usepackage[cm]{fullpage}

\usepackage[table]{xcolor}
\newcommand{\mc}[2]{\multicolumn{#1}{c}{#2}}
\newcommand{\mr}[2]{\multirow{#1}{*}{#2}}
\newcommand{\CC}[1]{\cellcolor{blue!#1}}
    \begin{document}
\begin{table}
    \centering
\renewcommand{\arraystretch}{1.2}
\setlength{\tabcolsep}{4pt}
    \begin{tabular}{@{}*{6}{c} lccc}
    \toprule
        &                       & \mc{4}{Background}&                   &               &               &
        \\
One     & Two   & \mc{2}{Amp}   & \mc{2}{Spectrum}  & \mr{2}{Subset}    & Stuff
        & \mc{2}{\mr{2}{Fraction}}
        \\
Column  & Column    & $1$       & $0.1$ & $1$   & $0.1$                 
        &           & All (Coal)    & \mc{2}{}                  
        \\ \midrule
\mr{8}{Stuff}         
    & \mr{4}{0.6}   & \mr{4}{3.7}           & \mr{4}{15}   &  \mr{4}{-3}
    & \mr{4}{-0.59}     
    & \CC{20} All   & \CC{20} 29 (2.7)      & \CC{20} $1875/9270$   
    & \CC{20} $(0.20)$  \\
    &   &   &   &   &                     
    & \CC{30}$\mu>0.2$  & \CC{30} 26 (2.2)  & \CC{30}$ 1225/4759$
    & \CC{30}$(0.26)$  \\
    &   &   &   &   &  
    & \CC{20}  $M>10^8$ & \CC{20} 17 (4.0)  & \CC{20} $608/2610$
    & \CC{20} $(0.23)$  \\
    &   &   &   &   &
    & \CC{30}$M>10^8$, $\mu>0.2$    
                        & \CC{30}6.9 (3.3)  & \CC{30}$214/478$  
    & \CC{30}$(0.45)$   \\
  & \mr{4}{1.0}     & \mr{4}{4.7}   & \mr{4}{17}
  & \mr{4}{-6}      & \mr{4}{-0.38} 
  & \CC{10} All     & \CC{10}7.7 (1.2)      & \CC{10}$4634/9270$
  & \CC{10}$(0.50)$  \\
    &   &   &   &   &
    &               & 4.8 (1.0)     & $ 2900/4759$          
    & $(0.61)$      \\
    &   &   &   &   &  
    & \CC{10}$M>10^8$, & \CC{10}4.9 (0.79)& \CC{10}$1422/2610$
    & \CC{10}$(0.54)$  \\
    &   &   &   &   &  
    & \CC{20}$M>10^8$,$\mu>0.2$      & \CC{20}0.35 (0.35) & \CC{20}$472/478$     & \CC{20}$(0.99)$  \\
    \bottomrule
    \end{tabular}
\caption{huh, finally my wonderful table :-)}
    \label{tab:params}
\end{table}
    \end{document}

Best Answer

Related Solutions

[Tex/LaTex] align, aligned and R Markdown

[Tex/LaTex] alternate row colors for only some columns

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