MATLAB: Reading Netcdf in a loop

netcdf

Good day guys,

Please I want this code in the attached file to read the data in the subfolders.

thank you for being there

Best Answer

When you are using ** then the files will not be in projectdir, they will be in a subfolder of it. So you need to replace

filenames = fullfile( projectdir, {dinfo.name} );

with

filenames = fullfile( {dinfo.folder}, {dinfo.name} );

The folder field did not exist for older MATLAB, but those older MATLAB did not support ** subfolder searches either.

Related Solutions

MATLAB: Reading multiple nc files in different subfolders within a directory

You should start again, because all of those cd calls are absolute chaos.

Start with something like this:

D = '/Users/Documents/test1';
S = dir(fullfile(D,'cyc*'));
S = {S([S.isdir]).name};
Z = struct('lat',{},'lon',{});
for ii = 1:numel(S)
    T = dir(fullfile(D,S{ii},'*.nc'));
    T = {T.name};
    for jj = 1:numel(T)
        F = fullfile(D,S{ii},T{jj})
        ... your code
        Z(ii,jj).lat = ...
        Z(ii,jj).lon = ...
        end
    end
end

https://www.mathworks.com/help/matlab/import_export/process-a-sequence-of-files.html

MATLAB: Move File to a different folder

projectdir = 'files';
dir_for_irregular = fullfile(projectdir, 'irregular');
if ~exist(dir_for_irregular, 'dir')
    mkdir(dir_for_irregular);
end
dinfo = dir( fullfile(projectdir, '*_nc'));    %eg atmPrf_C004.2010.093.12.28.G28_2013.3520_nc
filenames = fullfile( projectdir, {dinfo.name} );
nfiles = length(filenames);
for K = 1 : nfiles
    thisfile = filenames{K};
    temperature = ncread(thisfile, 'Temp') + 273.15;            %because they are in C
    if any(temperature(:) < 150) | any(temperature(:) > 350)
        %this file is irregular
        movefile(thisfile, dir_for_irregular);
    end
end

Best Answer

Related Solutions

MATLAB: Reading multiple nc files in different subfolders within a directory

MATLAB: Move File to a different folder

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