MATLAB: Improve Speed of Code (especially for loop)

for loopMATLABspeed

I want to analyse a log file that i created my self, basically the content is a CSV table with 5 columns {Timeindex , ActorName, X, Y, Z}. (There are only 8 Actors)
for that I made my first matlab function, in general matlab experience, ever xD which is this:
function Auswertung (matrix)
va = size(matrix);
bonePlotsX= zeros(8,2,100000);
bonePlotsY= zeros(8,2,100000);
bonePlotsZ= zeros(8,2,100000);
%Current row in which to write for each of the roads.
is={1,1,1,1,1,1,1,1};
for i=1:1:(va(1))
currentIndex=1;
var = matrix{i,2};
var= strtrim(var);
switch(var)
case "Hips"
currentIndex=1;
case "Spine"
currentIndex=2;
case "LeftUpperLeg"
currentIndex=3;
case "LeftLowerLeg"
currentIndex=4;
case "LeftFoot"
currentIndex=5;
case "RightUpperLeg"
currentIndex=6;
case "RightLowerLeg"
currentIndex=7;
case "RightFoot"
currentIndex=8;
end
bonePlotsX(currentIndex,1,is{currentIndex})=matrix{i,1};
bonePlotsX(currentIndex,2,is{currentIndex})=matrix{i,3};
bonePlotsY(currentIndex,1,is{currentIndex})=matrix{i,1};
bonePlotsY(currentIndex,2,is{currentIndex})=matrix{i,4};
bonePlotsZ(currentIndex,1,is{currentIndex})=matrix{i,1};
bonePlotsZ(currentIndex,2,is{currentIndex})=matrix{i,5};
is{currentIndex}= is{currentIndex}+1;
end
%First Bone Print
figure
subplot(3,1,1)
plot( bonePlotsX(1,1),bonePlotsX(1,2));
title("X of Hips");
subplot(3,1,1)
plot( bonePlotsY(1,1),bonePlotsY(1,2));
title("Y of Hips");
subplot(3,1,1)
plot( bonePlotsZ(1,1),bonePlotsZ(1,2));
title("Z of Hips");
end
The problem is it takes awfully long to complete the for loop. The sample file has just about 400 000 Lines, so not something I would consider much for a PC. How can I optimize this Loop? I tried pre allocating the bone matrices, 100 000 should be enough for even the longer logfiles.
As you see the end result should be a plot for all of the bones (in the code its just one for testing purposes)

Best Answer

You may check this example code:
[num,txt,raw] = xlsread('demo.xls') ;
name = txt ;
%%find nose
idx = strfind(name,'nose') ;
idx1 = strfind(name, 'nose');
idx1 = find(not(cellfun('isempty', idx1)));
%%nose data
data1 = num(idx1,:) ;
Like above you can follow for other required data.