When I use SEQDOTPLOT to make a dot plot of two sequences in the Bioinformatics Toolbox 1.1.1 (R14SP1), I find the resulting plot difficult to interpret since there is no proper documentation on how the result was obtained. There appears to be more than one way in which such a plot can be made and I could not find anything in the documentation stating which of the many methods is used.
MATLAB: How to interpret the plot made by the SEQDOTPLOT function in the Bioinformatics Toolbox 1.1.1 (R14SP1)
bioinformaticsBioinformatics Toolboxmatchesnucleotideseqdotplotsequences
Related Question
- Does CLEAVE command in the Bioinformatics Toolbox 1.1.1 (R14SP1) fail for Trypsin protease when cleavage sites are adjacent in the amino acid sequence
- How to convert a 64 bit, two’s complement value(binary vector)[ 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1] into a signed integer
- Does the Bioinformatics Toolbox support Selenocysteine
- Does the function NT2AA translate the nucleotide sequence incorrectly
- Does the score returned by NWALIGN not behave intuitively when I use the ambiguous symbols ‘W’ or ‘V’ in the Bioinformatics Toolbox 3.0 (R2007b)
- Plot +1 +1 -1 -1 rectangular pulse
Best Answer