Hello,
i want to cut out everything but the annular in between the red circles and display that in an axes.
Heres the original image:
annularcirclesection
clc; % Clear the command window.
close all; % Close all figures (except those of imtool.)
clearvars;workspace; % Make sure the workspace panel is showing.
format long g;format compact;fontSize = 16;%=======================================================================================
% Read in image.
fullFileName = fullfile(pwd, '63.jpg');[folder, baseFileName, ext] = fileparts(fullFileName);rgbImage = imread(fullFileName);% Shrink it to speed it up
% rgbImage = imresize(rgbImage, 0.75);
% Get the dimensions of the image.
[rows, columns, numberOfColorChannels] = size(rgbImage);% Display the original image.
subplot(2, 2, 1);imshow(rgbImage, []);axis on;caption = sprintf('Original Color Image "%s"', baseFileName);title(caption, 'FontSize', fontSize, 'Interpreter', 'None');drawnow;hp = impixelinfo(); % Set up status line to see values when you mouse over the image.
% Set up figure properties:
% Enlarge figure to full screen.
set(gcf, 'Units', 'Normalized', 'OuterPosition', [0 0.05 1 0.95]);% Get rid of tool bar and pulldown menus that are along top of figure.
% set(gcf, 'Toolbar', 'none', 'Menu', 'none');
% Give a name to the title bar.
set(gcf, 'Name', 'Demo by ImageAnalyst', 'NumberTitle', 'Off')% Get mask for outer gray, and inner blue parts of the wheel by doing color segmentations.
[mask, maskedRGBImage] = createMask(rgbImage);% Clean up noise by filling holes and taking largest blob only.
mask = imfill(mask, 'holes');mask = bwareafilt(mask, 1);% Display the mask image.
subplot(2, 2, 2);imshow(mask);axis on;title('Mask, binary image', 'FontSize', fontSize, 'Interpreter', 'None');% Mask the image and show the masked image.
subplot(2, 2, 3);imshow(maskedRGBImage, []);axis on;title('Masked RGB image', 'FontSize', fontSize, 'Interpreter', 'None');drawnow;hp = impixelinfo(); % Set up status line to see values when you mouse over the image.% Display the original image with mask boundary over it.
subplot(2, 2, 4);imshow(rgbImage, []);axis on;caption = sprintf('Color Image with Boundary');title(caption, 'FontSize', fontSize, 'Interpreter', 'None');drawnow;hp = impixelinfo(); % Set up status line to see values when you mouse over the image.% Plot boundaries
boundaries = bwboundaries(mask);hold on;numberOfBoundaries = size(boundaries, 1);for k = 1 : numberOfBoundaries thisBoundary = boundaries{k}; plot(thisBoundary(:,2), thisBoundary(:,1), 'r', 'LineWidth', 3);endhold off;function [BW,maskedRGBImage] = createMask(RGB)%createMask Threshold RGB image using auto-generated code from colorThresholder app.
% [BW,MASKEDRGBIMAGE] = createMask(RGB) thresholds image RGB using
% auto-generated code from the colorThresholder app. The colorspace and
% range for each channel of the colorspace were set within the app. The
% segmentation mask is returned in BW, and a composite of the mask and
% original RGB images is returned in maskedRGBImage.
% Auto-generated by colorThresholder app on 20-Aug-2018
%------------------------------------------------------
% Convert RGB image to chosen color space
I = rgb2hsv(RGB);% Define thresholds for channel 1 based on histogram settings
channel1Min = 0.959;channel1Max = 0.099;% Define thresholds for channel 2 based on histogram settings
channel2Min = 0.194;channel2Max = 1.000;% Define thresholds for channel 3 based on histogram settings
channel3Min = 0.410;channel3Max = 1.000;% Create mask based on chosen histogram thresholds
sliderBW = ( (I(:,:,1) >= channel1Min) | (I(:,:,1) <= channel1Max) ) & ... (I(:,:,2) >= channel2Min ) & (I(:,:,2) <= channel2Max) & ... (I(:,:,3) >= channel3Min ) & (I(:,:,3) <= channel3Max);BW = sliderBW;% Initialize output masked image based on input image.
maskedRGBImage = RGB;% Set background pixels where BW is false to zero.
maskedRGBImage(repmat(~BW,[1 1 3])) = 0;end
clc; % Clear the command window.
close all; % Close all figures (except those of imtool.)
clear; % Erase all existing variables. Or clearvars if you want.
workspace; % Make sure the workspace panel is showing.
format long g;format compact;fontSize = 22;%--------------------------------------------------------------------------------------------------------
% READ IN IMAGE
folder = pwd;baseFileName = 'image.png';% Get the full filename, with path prepended.
fullFileName = fullfile(folder, baseFileName);% Check if file exists.
if ~exist(fullFileName, 'file') % The file doesn't exist -- didn't find it there in that folder.
% Check the entire search path (other folders) for the file by stripping off the folder.
fullFileNameOnSearchPath = baseFileName; % No path this time.
if ~exist(fullFileNameOnSearchPath, 'file') % Still didn't find it. Alert user.
errorMessage = sprintf('Error: %s does not exist in the search path folders.', fullFileName); uiwait(warndlg(errorMessage)); return; endendgrayImage = imread(fullFileName);% Get the dimensions of the image.
% numberOfColorChannels should be = 1 for a gray scale image, and 3 for an RGB color image.
[rows, columns, numberOfColorChannels] = size(grayImage);if numberOfColorChannels > 1 % It's not really gray scale like we expected - it's color.
% Use weighted sum of ALL channels to create a gray scale image.
grayImage = rgb2gray(grayImage); % ALTERNATE METHOD: Convert it to gray scale by taking only the green channel,
% which in a typical snapshot will be the least noisy channel.
% grayImage = grayImage(:, :, 2); % Take green channel.
end% Display the image.
subplot(2, 2, 1);imshow(grayImage, []);title('Original Grayscale Image', 'FontSize', fontSize, 'Interpreter', 'None');impixelinfo;hFig = gcf;hFig.WindowState = 'maximized'; % May not work in earlier versions of MATLAB.
drawnow;%--------------------------------------------------------------------------------------------------------% SEGMENTATION OF IMAGE
% Get a binary image of just the blob and not including the black background or the white surround.
mask = grayImage > 0 & grayImage < 255; %imbinarize(grayImage);
subplot(2, 2, 2);imshow(mask, []);impixelinfo;title('Initial Mask Image', 'FontSize', fontSize, 'Interpreter', 'None');impixelinfo;% Display histogram of image but only the image within the mask
subplot(2, 3, 4);histogram(grayImage(mask), 0:255);grid on;title('Histogram of gray image', 'FontSize', fontSize);% Now get the threshold
thresh = 255 * graythresh(grayImage(mask))% Put a red line there at the threshold
xline(thresh, 'Color', 'r', 'LineWidth', 2);% Get a binary image of the bright stuff
brightStuff = grayImage >= thresh & mask;subplot(2, 3, 5);imshow(brightStuff, []);impixelinfo;title('Bright Pixels in Region', 'FontSize', fontSize, 'Interpreter', 'None');impixelinfo;subplot(2, 3, 6);darkStuff = ~brightStuff & mask;imshow(darkStuff, []);impixelinfo;title('Dark Pixels in Region', 'FontSize', fontSize, 'Interpreter', 'None');impixelinfo;
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