MATLAB: Are there a toolbox that help me to represent files .fastq from NGS how array (log2Ratio vs base_position)

Question

I watched the webinar Next Generation sequencing with Bioinformatics Toolbox:…ChIP-Seq Data, but I need to visualize the information in arrays, example HR-CGH, is it possible? I'm not expert in genetic but I want to apply some statistical tools to these data.

Thanks

Answer 1

Yes. You can import .fastq files that contain NGS data. click here for an intro. To import .fastq files use somthing like:

FASTQStruct = fastqread(yourfile)

To apply statistical tools... see the rest of the documentation